Influence of acacia mangium on soil fertility and bacterial community in eucalyptus plantations in the congolese coastal plains, Koutika, L.-S., Fiore Alessia, Tabacchioni Silvia, Aprea Giuseppe, Pereira A.P.A., and Bevivino Annamaria , Sustainability (Switzerland), Volume 12, Number 21, p.1-21, (2020)

Untargeted metagenomic investigation of the airway microbiome of cystic fibrosis patients with moderate-severe lung disease, Bacci, G., Taccetti G., Dolce D., Armanini F., Segata N., Di Cesare F., Lucidi V., Fiscarelli E., Morelli P., Casciaro R., et al. , Microorganisms, Jan-07-2020, Volume 8, Issue 7, Number 7, p.1-18, (2020)

Deciphering the Ecology of Cystic Fibrosis Bacterial Communities: Towards Systems-Level Integration, Bevivino, Annamaria, Bacci G., Drevinek P., Nelson M.T., Hoffman L., and Mengoni A. , Trends in Molecular Medicine, 19 August 2019, (2019)

Impact of clonally-related Burkholderia contaminans strains in two patients attending an Italian cystic fibrosis centre: a case report, Savi, Daniela, Quattrucci Serena, Trancassini Maria, Dalmastri Claudia, De Biase Riccardo V., Maggisano Marta, Palange Paolo, and Bevivino Annamaria , BMC Pulmonary Medicine, Jan-12-2019, Volume 19, Issue 1, Number 1, (2019)

The Impact of Soil-Applied Biochars From Different Vegetal Feedstocks on Durum Wheat Plant Performance and Rhizospheric Bacterial Microbiota in Low Metal-Contaminated Soil, Latini, A., Bacci G., Teodoro M., Mirabile Gattia Daniele, Bevivino Annamaria, and Trakal L. , Frontiers in Microbiology, Volume 10, (2019)

Soil organic matter quality along rotations in acacia and eucalypt plantations in the Congolese coastal plains, Koutika, Lydie-Stella, Ngoyi Sylvain, Cafiero Lorenzo M., and Bevivino Annamaria , Forest Ecosystems, 09/2019, Volume 6, Number 1, (2019)

Belowground Microbiota and the Health of Tree Crops, Mercado-Blanco, J, Abrantes I, A Caracciolo. Barra, Bevivino Annamaria, Ciancio A, Grenni P, Hrynkiewicz K, Kredrics L, and Proença DN , Frontiers in Microbiology, 06/2018, Volume 9, Number JUN, (2018)

How to Process Sputum Samples and Extract Bacterial DNA for Microbiota Analysis, Terranova, Leonardo, Oriano Martina, Teri Antonio, Ruggiero Luca, Tafuro Camilla, Marchisio Paola, Gramegna Andrea, Contarini Martina, Franceschi Elisa, Sottotetti Samantha, et al. , International Journal of Molecular Sciences, Jan-10-2018, Volume 19, Issue 10, p.3256, (2018)

Omics approaches on fresh-cut lettuce reveal global molecular responses to sodium hypochlorite and peracetic acid treatment, Daddiego, Loretta, Bianco Linda, Capodicasa Cristina, Carbone Fabrizio, Dalmastri Claudia, Daroda Lorenza, Del Fiore Antonella, De Rossi P., Di Carli Mariasole, Donini Marcello, et al. , J Sci Food Agric, Volume 98, Issue 2, Number 2, p.737-750, (2018)

A Different Microbiome Gene Repertoire in the Airways of Cystic Fibrosis Patients with Severe Lung Disease, Bacci, Giovanni, Mengoni Alessio, Fiscarelli Ersilia, Segata Nicola, Taccetti Giovanni, Dolce Daniela, Paganin Patrizia, Morelli Patrizia, Tuccio Vanessa, De Alessandri Alessandra, et al. , Int J Mol Sci, 2017 Jul 29, Volume 18, Issue 8, (2017)

Environmental Burkholderia cenocepacia Strain Enhances Fitness by Serial Passages during Long-Term Chronic Airways Infection in Mice, Bragonzi, A, Paroni M, Pirone L, Coladarci I, Ascenzioni F, and Bevivino Annamaria , Int J Mol Sci, 2017 Nov 14, Volume 18, Issue 11, (2017)

Impact of agricultural land management on soil bacterial community: A case study in the Mediterranean area., Bevivino, Annamaria, and Dalmastri Claudia , Soil biological communities and ecosystem resilience, Springer Series "Sustainability in Plant and Crop Protection, Number Springer, Cham, p.77-95, (2017)

Integration of multi- omics data for biomarker identification of food safety and quality, Perrotta, Gaetano, Donini Marcello, Demurtas Olivia Costantina, Mengoni A., De Rossi P., Del Fiore Antonella, Di Carli Mariasole, Bianco Linda, Daddiego Loretta, Sulli Maria, et al. , Food Science Book Series 2017. Edition "Science within Food: Up-to-date Advances on Research and Educational Ideas", Volume Editor: A. Méndez-Vilas. , (2017)

Bacterial community and proteome analysis of fresh-cut lettuce as affected by packaging., Di Carli, Mariasole, De Rossi P., Paganin Patrizia, Del Fiore Antonella, Lecce Francesca, Capodicasa Cristina, Bianco Linda, Perrotta Gaetano, Mengoni Alessio, Bacci Giovanni, et al. , FEMS microbiology letters, 2016 Jan, Volume 363, Number 1, p.fnv209, (2016)

Pyrosequencing Unveils Cystic Fibrosis Lung Microbiome Differences Associated with a Severe Lung Function Decline, Bacci, G., Paganin Patrizia, Lopez L., Vanni C., Dalmastri Claudia, Cantale Cristina, Daddiego L., Perrotta Gaetano, Dolce D., Morelli P., et al. , PLoS ONE, June 29, 2016, Volume 11, Issue 6, (2016)

Analysis of a pool of small plasmids from soil heterotrophic cultivable bacterial communities, Papaleo, Maria Cristiana, Fondi Marco, Maida Isabel, Perrin Elena, Bevivino Annamaria, Dalmastri Claudia, and Fani Renato , The Open Microbiology Journal, 08/2015, Volume 9, p.98-109, (2015)

Bacterial community and proteome analysis of fresh-cut lettuce as affected by packaging, Di Carli, Mariasole, De Rossi P., Paganin Patrizia, Del Fiore Antonella, Lecce Francesca, Capodicasa Cristina, Bianco L., Perrotta Gaetano, Mengoni Alessio, Bacci Giovanni, et al. , FEMS Microbiology Letters, 28 October 2015, Volume 362, (2015)

Changes in cystic fibrosis airway microbial community associated with a severe decline in lung function, Paganin, Patrizia, Fiscarelli E.V., Tuccio V., Chiancianesi M., Bacci G., Morelli P., Dolce D., Dalmastri Claudia, De Alessandri A., Lucidi V., et al. , PLoS ONE, 2015, Volume 10, (2015)

Indicatori di qualità per la IV gamma, P., Di Carli L. D., Perrotta Gaetano, Bevivino Annamaria, Bianco L., Capodicasa Cristina, Caprioli Raffaela, Carbone F., Dalmastri Claudia, De Rossi P., Di Carli M., et al. , Ingredienti Alimentari, 01/2015, Volume 78, (2015)

Soil Bacterial Community Response to Differences in Agricultural Management along with Seasonal Changes in a Mediterranean Region, Bevivino, Annamaria, Paganin Patrizia, Bacci Giovanni, Florio Alessandro, M. Pellicer Sampedro, Papaleo Maria Cristiana, Mengoni Alessio, Ledda Luigi, Fani Renato, Benedetti Anna, et al. , PlosOne, 08/2014, Volume 9, (2014)

The Evolving Polymicrobial Composition in the Airways of Patients with Cystic Fibrosis: implications for disease Progression and Clinical Management, Bevivino, Annamaria, and Bragonzi Alessandra , CML – Cystic Fibrosis, 12/2013, Volume 3, p.93–104, (2013)

Vertical distribution of bacterioplankton in Lake Averno in relation to water chemistry, Paganin, Patrizia, Chiarini L., Bevivino Annamaria, Dalmastri Claudia, Farcomeni A., Izzo G., Signorini A., Varrone C., and Tabacchioni Silvia , FEMS Microbiology Ecology, 2013///, Volume 84, p.176 - 188, (2013)

Interaction of environmental B. cenocepacia strains with cystic fibrosis and non-cystic fibrosis bronchial epithelial cells in vitro., Bevivino, Annamaria, Pirone Luisa, Pilkington Ruth, Cifani Noemi, Dalmastri Claudia, Callaghan Máire, Ascenzioni Fiorentina, and McClean Siobhan , Microbiology (Reading, England), 2012 Feb 9, (2012)

Modelling Co-Infection of the Cystic Fibrosis Lung by Pseudomonas aeruginosa and Burkholderia cenocepacia Reveals Influences on Biofilm Formation and Host Response, Bragonzi, Alessandra, Farulla Ilaria, Paroni Moira, Twomey Kate B., Pirone Luisa, Lorè Nicola Ivan, Bianconi Irene, Dalmastri Claudia, Ryan Robert P., and Bevivino Annamaria , PLOS ONE, 12/2012, Volume 7, p.1-12, (2012)

Genetic relationships among Italian and Mexican maize-rhizosphere Burkholderia cepacia complex (BCC) populations belonging to Burkholderia cenocepacia IIIB and BCC6 group, Bevivino, Annamaria, Costa Barbara, Cantale Cristina, Cesarini Silvia, Chiarini L., Tabacchioni Silvia, Caballero-Mellado Jesus, and Dalmastri Claudia , BMC Microbiology, 10/2011, Volume 11, Number 1, p.228, (2011)